http://cia.vc/stats/project/minfx79The minfx optimisation libraryThe minfx project is a python package for numerical optimization, being a large collection of minimization algorithms.Noneminfxhttps://gna.org/projects/minfx/NoneSubversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 11 Aug 2011 15:33:43 +0200edward@nmr-relax.com<E1QrVOJ-0004e2-SU@subversion.gna.org>Thu, 11 Aug 2011 15:33:43 +0200minfx85bugmantrunk/minfx/line_search/test_functions.pyModified the test module so that it only executes when run directly from python.121313075699Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 11 Aug 2011 15:03:29 +0200edward@nmr-relax.com<E1QrUv3-0000vo-4n@subversion.gna.org>Thu, 11 Aug 2011 15:03:29 +0200minfx84bugmantrunk/minfx/base_classes.pytrunk/minfx/cauchy_point.pytrunk/minfx/constraint_linear.pytrunk/minfx/dogleg.pytrunk/minfx/fletcher_reeves_cg.pytrunk/minfx/generic.pytrunk/minfx/hestenes_stiefel_cg.pytrunk/minfx/line_search/more_thuente.pytrunk/minfx/line_search/nocedal_wright_interpol.pytrunk/minfx/method_of_multipliers.pytrunk/minfx/ncg.pytrunk/minfx/polak_ribiere_cg.pytrunk/minfx/polak_ribiere_plus_cg.pytrunk/minfx/steihaug_cg.pyA few more epydoc fixes, mainly for lists in the docstrings.4761313073878Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 11 Aug 2011 14:40:41 +0200edward@nmr-relax.com<E1QrUYz-00073q-ES@subversion.gna.org>Thu, 11 Aug 2011 14:40:41 +0200minfx83bugmantrunk/minfx/base_classes.pytrunk/minfx/bfgs.pytrunk/minfx/cauchy_point.pytrunk/minfx/constraint_linear.pytrunk/minfx/coordinate_descent.pytrunk/minfx/dogleg.pytrunk/minfx/exact_trust_region.pytrunk/minfx/fletcher_reeves_cg.pytrunk/minfx/generic.pytrunk/minfx/grid.pytrunk/minfx/hessian_mods/cholesky_mod.pytrunk/minfx/hessian_mods/eigenvalue.pytrunk/minfx/hessian_mods/gmw81.pytrunk/minfx/hessian_mods/se99.pytrunk/minfx/hestenes_stiefel_cg.pytrunk/minfx/levenberg_marquardt.pytrunk/minfx/line_search/backtrack.pytrunk/minfx/line_search/interpolate.pytrunk/minfx/line_search/more_thuente.pytrunk/minfx/line_search/nocedal_wright_interpol.pytrunk/minfx/line_search/nocedal_wright_wolfe.pytrunk/minfx/line_search/test_functions.pytrunk/minfx/method_of_multipliers.pytrunk/minfx/ncg.pytrunk/minfx/newton.pytrunk/minfx/polak_ribiere_cg.pytrunk/minfx/polak_ribiere_plus_cg.pytrunk/minfx/simplex.pytrunk/minfx/steepest_descent.pytrunk/minfx/steihaug_cg.pyUpdated all of the docstrings to the epydoc format (http://epydoc.sourceforge.net).22671313072515Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Tue, 12 Apr 2011 11:20:33 +0200edward@nmr-relax.com<E1Q9Zlx-0000dP-1B@subversion.gna.org>Tue, 12 Apr 2011 11:20:33 +0200minfx81bugmantrunk/minfx/grid.pyA grid search of 1 increment in one of the dimensions is now properly supported.
This problem was reported by Tiago Pais <tpais att itqb dott unl dott pt> as a relax
(http://nmr-relax.com) bug at https://gna.org/bugs/index.php?18019.311302600045Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 27 Jan 2011 09:39:24 +0100edward@nmr-relax.com<E1PiNO0-0003HQ-Hy@subversion.gna.org>Thu, 27 Jan 2011 09:39:24 +0100minfx80bugmantrunk/CHANGESPorted the CHANGES file from the 1.0.3 tag.
The command used was:
svn merge -r76:77 svn+ssh://bugman@svn.gna.org/svn/minfx/tags/1.0.3
.....
r77 | bugman | 2011-01-27 09:32:10 +0100 (Thu, 27 Jan 2011) | 5 lines
Changed paths:
M /tags/1.0.3/CHANGES
Updated the CHANGES file for minfx version 1.0.3.
This will be available at https://gna.org/projects/minfx.
.....381296117575Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 27 Jan 2011 09:36:12 +0100edward@nmr-relax.com<E1PiNKu-0003EA-50@subversion.gna.org>Thu, 27 Jan 2011 09:36:12 +0100minfx79bugmantrunk/doc/Release_ChecklistAdded the rsync --no-perms arg to the distribution files syncing command.141296117388Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 27 Jan 2011 09:32:44 +0100edward@nmr-relax.com<E1PiNHY-0002zP-Ne@subversion.gna.org>Thu, 27 Jan 2011 09:32:44 +0100minfx78bugmantags/1.0.3/setup.pyUpdated the version number to 1.0.3.141296117192Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 27 Jan 2011 09:32:11 +0100edward@nmr-relax.com<E1PiNH1-0002xM-4l@subversion.gna.org>Thu, 27 Jan 2011 09:32:11 +0100minfx77bugmantags/1.0.3/CHANGESUpdated the CHANGES file for minfx version 1.0.3.
This will be available at https://gna.org/projects/minfx.381296117142Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 27 Jan 2011 09:30:48 +0100edward@nmr-relax.com<E1PiNFg-0002wA-A7@subversion.gna.org>Thu, 27 Jan 2011 09:30:48 +0100minfx76bugmantrunk/doc/Release_ChecklistUpdated the release checklist to use a svn_msg commit message file for the initial tagging.161296117059Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 27 Jan 2011 09:16:03 +0100edward@nmr-relax.com<E1PiN1P-0001IK-5X@subversion.gna.org>Thu, 27 Jan 2011 09:16:03 +0100minfx75bugmantags/1.0.3/Minfx version 1.0.3.
This release introduces a preliminary simulated annealing package based on scipy, and heavily modifies and improves the grid search algorithm.01296116176Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Mon, 15 Nov 2010 16:59:01 +0100edward@nmr-relax.com<E1PI1SP-0000No-Q3@subversion.gna.org>Mon, 15 Nov 2010 16:59:01 +0100minfx74bugmantrunk/minfx/generic.pyFixes for the scipy SA annealing.361289836752Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Mon, 26 Jul 2010 11:34:54 +0200edward@nmr-relax.com<E1OdK5G-0004jX-Su@subversion.gna.org>Mon, 26 Jul 2010 11:34:54 +0200minfx73bugmantrunk/doc/Release_ChecklistUpdated the release checklist for the new freshmeat layout.111280136918Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Mon, 26 Jul 2010 11:34:18 +0200edward@nmr-relax.com<E1OdK4g-0004hd-73@subversion.gna.org>Mon, 26 Jul 2010 11:34:18 +0200minfx72bugmantrunk/minfx/generic.pyMade the scipy SA annealing import optional.
This allows minfx to be used without installing scipy.301280136913Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 22 Jul 2010 15:57:32 +0200edward@nmr-relax.com<E1ObwHE-0008DB-UL@subversion.gna.org>Thu, 22 Jul 2010 15:57:32 +0200minfx71bugmantrunk/minfx/generic.pyIncorporated the scipy SA code into the generic interface.1381279807075Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Thu, 22 Jul 2010 15:32:38 +0200edward@nmr-relax.com<E1Obvt8-0005Ah-6C@subversion.gna.org>Thu, 22 Jul 2010 15:32:38 +0200minfx70bugmantrunk/minfx/scipy_subset/trunk/minfx/scipy_subset/LICENSE.txttrunk/minfx/scipy_subset/__init__.pytrunk/minfx/scipy_subset/anneal.pyAdded a package containing a tiny fraction of the scipy (http://www.scipy.org/) package.
This code is distributed under a BSD licence which is included. Currently only the simulated
annealing module scipy.optimize.anneal is included. This packages is temporary until simulated
annealing is directly implemented into minfx.3771279805569Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Wed, 21 Jul 2010 14:57:12 +0200edward@nmr-relax.com<E1ObYrI-0003BJ-4O@subversion.gna.org>Wed, 21 Jul 2010 14:57:12 +0200minfx69bugmantrunk/minfx/grid.pyBug fix for the grid_point_array() function for when the verbosity arg is greater than 2.
The print out was referencing a non-existent data structure.131279717045Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Tue, 23 Feb 2010 17:40:19 +0100edward@nmr-relax.com<E1Njxo3-0006IR-UI@subversion.gna.org>Tue, 23 Feb 2010 17:40:19 +0100minfx68bugmantrunk/minfx/grid.pyFix for grid_split() for when the number of divisions is more than the total number of points.
The last divisions are discarded in this case.251266943230Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Mon, 22 Feb 2010 22:40:10 +0100edward@nmr-relax.com<E1Njg0g-00023k-Cu@subversion.gna.org>Mon, 22 Feb 2010 22:40:10 +0100minfx67bugmantrunk/minfx/grid.pyAdded the function grid_point_array() for finding the minimum point in an array of grid points.
This allows for completely non-linear grid searches as each point is arbitrary.741266874821Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Mon, 22 Feb 2010 22:16:08 +0100edward@nmr-relax.com<E1NjfdQ-0007Mu-1C@subversion.gna.org>Mon, 22 Feb 2010 22:16:08 +0100minfx66bugmantrunk/minfx/grid.pyAdded support for constraints into grid_split().
Points which violate the constraints are now eliminated prior to the grid subdivision.1171266873379Subversion CIA Bot client shell script1.1from gna.org (petzi.bearstech.com [78.40.125.75])
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for cia@cia.navi.cx; Mon, 22 Feb 2010 22:04:34 +0100edward@nmr-relax.com<E1NjfSE-0005sx-In@subversion.gna.org>Mon, 22 Feb 2010 22:04:34 +0100minfx65bugmantrunk/minfx/grid.pyAdded the grid_split() generator function.
This takes a linear gird, converts it to a linear array of points, and then splits these returning
each grid subdivision.911266872686